Acetyl Pepstatin

Acetyl Pepstatin is an HIV-1 protease inhibitor (Ki = 20 nM at pH 4.7), also inhibits HIV-2 protease (Ki = 5 nM at pH 4.7). It shows antiviral property.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.

CAT No: R1048

CAS No:11076-29-2

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M.F/Formula
C31H57N5O9
M.W/Mr.
643.81
Sequence
Ac-Val-Val-Sta-Ala-Sta-OH
Labeling Target
HIV-1 protease
Appearance
Solid powder
Purity
>98% (or refer to the Certificate of Analysis)
Activity
Inhibitor

Acetyl Pepstatin is a synthetic peptide-based inhibitor renowned for its high specificity and potency against aspartic proteases, most notably pepsin, cathepsin D, and renin. Structurally, it comprises a pentapeptide backbone featuring an N-terminal acetyl modification, which enhances its stability and bioactivity in biochemical environments. Its unique mode of action involves reversible binding to the active sites of target proteases, thereby preventing substrate cleavage and downstream proteolytic events. Acetyl Pepstatin has become a valuable tool in protein chemistry, enzymology, and molecular biology, where precise modulation of protease activity is essential for dissecting complex biological processes and maintaining protein integrity during experimental workflows.

Protease inhibition studies: As a highly selective aspartic protease inhibitor, acetylated pepstatin is widely utilized in mechanistic enzymology to elucidate the role of aspartic proteases in protein degradation pathways. By incorporating this inhibitor into in vitro assays, researchers can achieve targeted suppression of enzymatic activity, enabling detailed kinetic analyses and functional characterization of protease-substrate interactions. Its specificity allows scientists to distinguish the contributions of aspartic proteases from those of other protease classes, thereby refining interpretations of proteolytic events in complex biological samples.

Protein purification and sample preparation: The inclusion of acetyl pepstatin in lysis buffers or extraction protocols is a standard practice for preserving protein samples during purification workflows. By effectively inhibiting endogenous aspartic proteases, it minimizes unwanted proteolytic degradation of target proteins, ensuring higher yields and improved sample integrity for downstream applications such as mass spectrometry, Western blotting, or structural studies. This protective function is particularly critical when working with tissues or cell lysates rich in active proteases.

Cellular pathway analysis: In cell-based studies, acetylated pepstatin serves as a valuable reagent for probing the physiological roles of aspartic proteases in processes such as autophagy, apoptosis, and antigen processing. By selectively blocking protease activity, researchers can investigate the consequences of protease inhibition on cellular signaling pathways, protein turnover, and organelle function. This approach aids in mapping the molecular networks regulated by aspartic proteases and identifying potential regulatory nodes within these pathways.

Peptide functional studies: Owing to its well-defined peptide structure and inhibitory profile, acetyl pepstatin is frequently employed in studies examining peptide-protease interactions, substrate specificity, and inhibitor design. Its use as a reference inhibitor facilitates the evaluation of novel peptide analogs or small-molecule inhibitors, providing a benchmark for potency and selectivity in assay development. This application supports advances in rational drug design and the development of new chemical tools for protease research.

Analytical biochemistry: In analytical settings, acetyl pepstatin enhances the accuracy and reproducibility of proteomic and biochemical assays by preventing unwanted proteolysis during sample handling. Its robust inhibitory action is especially valuable in protocols that require prolonged incubation or involve sensitive protein targets. By maintaining sample composition, it supports high-fidelity analysis of protein structure, post-translational modifications, and protein-protein interactions, thereby contributing to more reliable experimental outcomes in proteomics and molecular biology.

Long-term Storage Conditions
Soluble in DMSO
Shipping Condition
Shipped under ambient temperature as non-hazardous chemical. This product is stable enough for a few weeks during ordinary shipping and time spent in Customs.
Short-term Storage Conditions
Dry, dark and at 0 - 4 °C
Solubility
-20 °C
InChI
InChI=1S/C31H57N5O9/c1-15(2)11-21(35-30(44)28(18(7)8)36-31(45)27(17(5)6)33-20(10)37)23(38)13-25(40)32-19(9)29(43)34-22(12-16(3)4)24(39)14-26(41)42/h15-19,21-24,27-28,38-39H,11-14H2,1-10H3,(H,32,40)(H,33,37)(H,34,43)(H,35,44)(H,36,45)(H,41,42)/t19-,21-,22-,23-,24-,27-,28-/m0/s1
InChI Key
WKYBEGDEGRCZNF-LBTYKNIQSA-N
Isomeric SMILES
C[C@@H](C(=O)N[C@@H](CC(C)C)[C@H](CC(=O)O)O)NC(=O)C[C@@H]([C@H](CC(C)C)NC(=O)[C@H](C(C)C)NC(=O)[C@H](C(C)C)NC(=O)C)O
BoilingPoint
992.8±65.0 °C at 760 mmHg
Melting Point
N/A

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