N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid

N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid is a protected amino acid derivative featuring an L-2,4-diaminobutyric acid backbone bearing two orthogonally protected amino functionalities: an N-α fluorenylmethoxycarbonyl (Fmoc) group and an N-γ tert-butoxycarbonyl (Boc) group. The molecule contains both an amino acid carboxyl group and protected amines, with the side chain presenting a diamino motif whose reactivity is masked by the Fmoc and Boc carbamate protections to control chemoselectivity during stepwise assembly. In peptide chemistry and chemical biology, this compound is used as a protected building block for incorporating a diamino-substituted amino acid unit into protected peptide intermediates and for preparing defined amino acid derivatives for structure-activity studies or molecular labeling workflows.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.

CAT No: CP05324

CAS No:125238-99-5

Synonyms/Alias:125238-99-5;Fmoc-Dab(Boc)-OH;(S)-2-((((9H-Fluoren-9-yl)methoxy)carbonyl)amino)-4-((tert-butoxycarbonyl)amino)butanoic acid;MFCD00151941;Fmoc-N4-Boc-L-2,4-diaminobutyric acid;N-Fmoc-N'-Boc-L-2,4-diaminobutyric acid;Nalpha-Fmoc-Ngamma-Boc-L-2,4-diaminobutyric acid;AmbotzFAA1364;MolPort-001-758-712;ZINC2517150;LIWKOFAHRLBNMG-FQEVSTJZSA-N;Na-Fmoc-N-Boc-L-2,4-diaminobutyric acid;(S)-4-(Boc-amino)-2-(Fmoc-amino)butyric acid;(S)-4-tert-Butoxycarbonylamino-2-(9H-fluoren-9-ylmethoxycarbonylamino)butyric acid;N-alpha-(9-Fluorenylmethyloxycarbonyl)-N-gamma-t-butyloxycarbonyl-L-2,4-diaminobutyric acid

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M.F/Formula
C24H28N2O6
M.W/Mr.
440.5
Sequence
Three Letter Code:Fmoc-Dab(Boc)(Boc)-OH

N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid is a protected L-2,4-diaminobutyric acid derivative bearing an Fmoc group on the α-amino function and a Boc group on the γ-amino side-chain position. The molecule retains a stereogenic center at the α-carbon, with the side chain configured to present an additional protected amine for orthogonal functionalization. The presence of two distinct, acid-labile and base-labile protecting groups enables controlled deprotection sequences, while the diamino backbone supports strong nucleophilicity after deprotection for peptide coupling and further derivatization. As a chiral, multifunctional amino acid building block, it functions as a chemically defined intermediate for constructing polyamine-containing peptides and for synthesizing amino acid derivatives used in structure-guided molecular design.

1. Peptide Synthesis

N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid is applied in solid-phase peptide synthesis workflows where orthogonally protected diamino functionality supports stepwise chain assembly. The Fmoc-protected α-amine participates in standard peptide coupling after base-mediated Fmoc removal, while the Boc-protected γ-amine remains masked during coupling to prevent side reactions and maintain sequence fidelity. The resulting peptide products can incorporate a protected polyamine-like residue that later undergoes selective Boc deprotection to enable side-chain elaboration or conjugation. Downstream, the compound enables preparation of diamino acid-containing peptides and peptide fragments used for biochemical studies and synthetic method development in peptide chemistry.

2. Side-Chain Functionalization

N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid is suitable for side-chain functionalization strategies that convert the γ-amino group into reactive handles after orthogonal deprotection. The diamino structure allows conversion of the protected γ-amine into nucleophilic sites for acylation, alkylation, or formation of urea and amide derivatives, while the Fmoc group can be removed under base to expose the α-amine for additional coupling chemistry. Boc protection provides a practical handle for controlling chemoselectivity, enabling sequential modification without cross-reactivity between amine sites. The resulting functionalized amino acid derivatives can be used to generate peptidomimetics, molecular probes, and chemically defined intermediates for further synthetic elaboration.

3. Chemical Biology Probes

N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid supports chemical biology research requiring incorporation of diamino residues into recognition scaffolds and labeling-ready peptide analogs. The protected amine architecture allows controlled introduction of a side-chain amine that can later be converted into bioconjugation-compatible groups, including amide-linked tags or linker-bearing derivatives. The stereochemically defined L-configuration helps maintain conformational and binding-relevant geometry when used as a residue in peptide-based probes. Downstream applications include preparation of labeled peptide fragments, affinity reagents, and tool compounds for studying molecular interactions where orthogonal protecting-group logic is required for reproducible probe construction.

4. Peptidomimetics And SAR

N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid is used in peptidomimetic and structure-activity relationship studies where diamino acid incorporation tunes charge distribution and hydrogen-bonding patterns. The molecule's two protected amines enable systematic variation of side-chain derivatization while maintaining a consistent backbone stereochemistry across analog series. Fmoc/Boc orthogonality supports parallel synthesis of analogs in which the γ-amine is selectively unveiled for conjugation or further functional group installation, enabling controlled exploration of steric and electronic effects. The compound can serve as a defined intermediate for assembling SAR libraries of peptide-like scaffolds and for generating chemically comparable analogs for analytical and mechanistic evaluation.

5. Pharmaceutical Intermediate Preparation

N-α-Fmoc-N-γ-Boc-L-2,4-diaminobutyric acid is relevant to pharmaceutical intermediate preparation and fine chemical synthesis where protected amino acid derivatives are required for controlled manufacturing routes. The orthogonal protecting groups provide a practical strategy for protecting reactive amines during intermediate isolation and purification, while enabling predictable deprotection steps to reveal functional groups for subsequent coupling or derivatization. The diamino backbone can be carried through multistep synthesis as a chiral intermediate, supporting downstream formation of amide, urea, or linker-bearing motifs commonly encountered in peptide-derived active ingredients and related intermediates. Industrially, the compound's defined stereochemistry and protection pattern make it suitable for scalable synthesis planning of amino acid-derived building blocks used in applied product development.

Abbr
Fmoc-Dab(Boc)-OH
InChI
1S/C24H28N2O6/c1-24(2,3)32-22(29)25-13-12-20(21(27)28)26-23(30)31-14-19-17-10-6-4-8-15(17)16-9-5-7-11-18(16)19/h4-11,19-20H,12-14H2,1-3H3,(H,25,29)(H,26,30)(H,27,28)/t20-/m0/s1
InChI Key
LIWKOFAHRLBNMG-FQEVSTJZSA-N
Canonical SMILES
CC(C)(C)OC(=O)NCCC(C(=O)O)NC(=O)OCC1C2=CC=CC=C2C3=CC=CC=C13

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