3xFlag

3x Flag-tag is often used in tandem purification and protein purification.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.

CAT No: HB00097

Synonyms/Alias:3X FLAG peptide TFA;3X Flag Peptide Trifluoroacetate;402750-12-3;MFCD32666184;

Custom Peptide Synthesis
cGMP Peptide
  • Registration of APIs
  • CMC information required for an IND
  • IND and NDA support
  • Drug master files (DMF) filing
M.F/Formula
C122H170F3N31O51S
M.W/Mr.
2975.9
Sequence
One Letter Code:MDYKDHDGDYKDHDIDYKDDDDK
Three Letter Code:H-Met-Asp-Tyr-Lys-Asp-His-Asp-Gly-Asp-Tyr-Lys-Asp-His-Asp-Ile-Asp-Tyr-Lys-Asp-Asp-Asp-Asp-Lys-OH.TFA

3xFlag is a synthetic peptide epitope tag widely utilized in molecular biology and biochemistry for the precise detection, purification, and characterization of recombinant proteins. Comprising three tandem repeats of the classic FLAG sequence, this peptide tag is engineered to enhance antigenicity and improve binding affinity to anti-FLAG antibodies. Its compact size, high specificity, and compatibility with a variety of experimental systems make it a preferred choice for protein labeling in both prokaryotic and eukaryotic expression platforms. The 3xFlag tag is valued for its minimal impact on protein function and structure, enabling researchers to study protein interactions, localization, and dynamics with minimal perturbation to native biological processes.

Protein Detection: In protein expression studies, the 3xFlag peptide is employed as a highly sensitive epitope tag for immunodetection applications. By fusing the tag to proteins of interest, researchers can leverage anti-FLAG antibodies for Western blotting, immunofluorescence, and ELISA assays. The triplicate arrangement of the FLAG sequence significantly improves detection sensitivity by increasing the number of available epitopes, thereby facilitating robust and reproducible visualization of tagged proteins, even at low expression levels.

Affinity Purification: The 3xFlag tag is extensively used in affinity purification protocols to isolate recombinant proteins from complex biological matrices. Its strong and specific interaction with anti-FLAG affinity resins allows for efficient capture and elution of tagged proteins under mild, non-denaturing conditions. This application is particularly advantageous in proteomics and structural biology, where maintaining protein integrity and activity is crucial for downstream analyses such as mass spectrometry, crystallography, or functional assays.

Protein-Protein Interaction Studies: Researchers frequently utilize the 3xFlag epitope in co-immunoprecipitation and pull-down assays to investigate protein-protein interactions within cells or cell extracts. The enhanced binding properties of the tag enable selective enrichment of protein complexes, supporting the identification and characterization of interaction partners. This approach is instrumental in mapping signaling pathways, elucidating molecular mechanisms, and validating candidate interactors identified through high-throughput screening.

Cellular Localization: The 3xFlag tag serves as a reliable marker for tracking the subcellular localization of fusion proteins in live or fixed cells. By incorporating the tag into expression constructs, scientists can use immunocytochemistry or immunohistochemistry to visualize the spatial distribution and trafficking of proteins within various cellular compartments. This application provides valuable insights into protein function, dynamics, and compartment-specific activity, contributing to a deeper understanding of cellular processes.

Quality Control and Expression Monitoring: The use of the 3xFlag peptide tag supports rigorous quality control and monitoring of recombinant protein expression in research and industrial settings. Its compatibility with standardized detection reagents enables rapid assessment of protein yield, solubility, and stability throughout the production pipeline. This facilitates process optimization, troubleshooting, and scale-up, ensuring consistent performance in applications ranging from basic research to biomanufacturing development.

Shipping Condition
Room temperature in continental US; may vary elsewhere.
InChI
InChI=1S/C120H169N31O49S.C2HF3O2/c1-4-56(2)98(119(198)150-84(49-96(174)175)117(196)139-72(37-59-21-27-64(154)28-22-59)106(185)134-68(15-7-11-32-123)103(182)145-81(46-93(168)169)114(193)147-83(48-95(172)173)116(195)148-82(47-94(170)171)115(194)146-78(43-90(162)163)110(189)135-69(120(199)200)16-8-12-33-124)151-118(197)85(50-97(176)177)149-108(187)74(39-61-52-127-55-130-61)141-113(192)80(45-92(166)167)144-101(180)66(13-5-9-30-121)132-104(183)70(35-57-17-23-62(152)24-18-57)137-109(188)76(41-88(158)159)131-86(155)53-128-100(179)75(40-87(156)157)142-107(186)73(38-60-51-126-54-129-60)140-112(191)79(44-91(164)165)143-102(181)67(14-6-10-31-122)133-105(184)71(36-58-19-25-63(153)26-20-58)138-111(190)77(42-89(160)161)136-99(178)65(125)29-34-201-3;3-2(4,5)1(6)7/h17-28,51-52,54-56,65-85,98,152-154H,4-16,29-50,53,121-125H2,1-3H3,(H,126,129)(H,127,130)(H,128,179)(H,131,155)(H,132,183)(H,133,184)(H,134,185)(H,135,189)(H,136,178)(H,137,188)(H,138,190)(H,139,196)(H,140,191)(H,141,192)(H,142,186)(H,143,181)(H,144,180)(H,145,182)(H,146,194)(H,147,193)(H,148,195)(H,149,187)(H,150,198)(H,151,197)(H,156,157)(H,158,159)(H,160,161)(H,162,163)(H,164,165)(H,166,167)(H,168,169)(H,170,171)(H,172,173)(H,174,175)(H,176,177)(H,199,200);(H,6,7)/t56-,65-,66-,67-,68-,69-,70-,71-,72-,73-,74-,75-,76-,77-,78-,79-,80-,81-,82-,83-,84-,85-,98-;/m0./s1
InChI Key
GTFCLKXQJOUAAB-XMLADREXSA-N

Useful Tools

Peptide Calculator

Abbreviation List

Peptide Glossary

If you have any peptide synthesis requirement in mind, please do not hesitate to contact us at . We will endeavor to provide highly satisfying products and services.

Featured Services
cGMP Peptide ServicePeptide Modification ServicesPeptide CDMOCustom Conjugation ServicePeptide Analysis ServicesPeptide Synthesis ServicesPeptide Nucleic Acids SynthesisEpitope Mapping Services
Hot Products
About us

Creative Peptides is a trusted CDMO partner specializing in high-quality peptide synthesis, conjugation, and manufacturing under strict cGMP compliance. With advanced technology platforms and a team of experienced scientists, we deliver tailored peptide solutions to support drug discovery, clinical development, and cosmetic innovation worldwide.

From custom peptide synthesis to complex peptide-drug conjugates, we provide flexible, end-to-end services designed to accelerate timelines and ensure regulatory excellence. Our commitment to quality, reliability, and innovation has made us a preferred partner across the pharmaceutical, biotechnology, and personal care industries.

Our Customers