Proteasome-activating peptide 1 TFA

Proteasome-activating peptide 1 TFA is a regulatory segment featuring polar, aromatic, and basic residues that influence helix-coil equilibria. Researchers employ it to study peptide-induced conformational transitions, interaction surfaces, and folding dynamics. The TFA salt ensures consistent solubility. Its structural features support detailed biochemical assays.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.
Proteasome-activating peptide 1 TFA(CAS 1565763-62-3)

CAT No: R2322

CAS No:1565763-62-3

Synonyms/Alias:Proteasome-activating peptide 1 TFA;1565763-62-3;H27782;

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M.F/Formula
C65H117F3N22O15S4
M.W/Mr.
1632
Sequence
One Letter Code:IPRCRKMPGVKMC
Three Letter Code:H-Ile-Pro-Arg-Cys-Arg-Lys-Met-Pro-Gly-Val-Lys-Met-Cys-NH2.TFA

Proteasome-activating peptide 1 TFA is a synthetic peptide designed to modulate proteasome function, making it a valuable reagent in biochemical and cell biology research. As a sequence-specific activator, it interacts with the 20S proteasome complex, influencing protein degradation pathways that are central to cellular homeostasis and protein quality control. The trifluoroacetate (TFA) salt form enhances its stability and solubility, facilitating its use in various experimental settings. Researchers utilize this compound to probe the dynamic regulation of proteasomal activity, dissect protein turnover mechanisms, and investigate the molecular basis of proteostasis in both normal and stressed cellular environments.

Proteasome function analysis: In studies focused on the ubiquitin-proteasome system, this peptide serves as a precise tool to stimulate proteasome catalytic activity. By increasing the rate of substrate degradation, it allows researchers to assess the impact of enhanced proteolysis on cellular protein composition. This is particularly relevant in elucidating the adaptive responses of cells to proteotoxic stress, as well as in characterizing the molecular determinants of protein turnover under varying physiological conditions.

Protein homeostasis research: The peptide is instrumental for dissecting the mechanisms underlying protein quality control. By selectively activating the proteasome, it enables the study of misfolded or damaged protein clearance, providing insights into the maintenance of cellular proteostasis. Such investigations are critical for understanding the balance between protein synthesis and degradation, as well as the cellular strategies that mitigate the accumulation of potentially toxic protein aggregates.

Cellular pathway modulation: Researchers employ this activator in experiments designed to modulate intracellular signaling pathways that are sensitive to proteasomal activity. By fine-tuning proteasome function, it becomes possible to examine downstream effects on regulatory proteins, transcription factors, and cell cycle mediators. This approach is valuable for mapping the interplay between protein degradation and critical cellular processes such as apoptosis, cell proliferation, and stress response signaling.

Drug discovery and screening: The peptide is also used in high-throughput screening assays aimed at identifying novel modulators of proteasome activity. Its ability to enhance proteasomal degradation provides a benchmark for evaluating the efficacy of candidate compounds, especially in the context of diseases associated with proteostasis imbalance. By serving as a reference activator, it aids in the validation of assay platforms and the characterization of compound libraries targeting the proteasome.

Biochemical assay development: In the context of assay optimization, this peptide facilitates the establishment of robust, reproducible protocols for measuring proteasome activity. Its defined mode of action and predictable effects on proteolytic rates make it an ideal standard for calibrating fluorometric, colorimetric, or luminescent proteasome assays. This supports the development of quantitative methods for assessing proteasome function in both cell-free and cellular systems, ensuring data reliability and comparability across experimental setups.

InChI
InChI=1S/C63H116N22O13S4.C2HF3O2/c1-7-36(4)48(66)61(98)85-29-15-21-46(85)58(95)78-40(19-13-27-73-63(70)71)54(91)82-44(34-100)56(93)76-39(18-12-26-72-62(68)69)52(89)75-37(16-8-10-24-64)53(90)80-42(23-31-102-6)60(97)84-28-14-20-45(84)57(94)74-32-47(86)83-49(35(2)3)59(96)79-38(17-9-11-25-65)51(88)77-41(22-30-101-5)55(92)81-43(33-99)50(67)87;3-2(4,5)1(6)7/h35-46,48-49,99-100H,7-34,64-66H2,1-6H3,(H2,67,87)(H,74,94)(H,75,89)(H,76,93)(H,77,88)(H,78,95)(H,79,96)(H,80,90)(H,81,92)(H,82,91)(H,83,86)(H4,68,69,72)(H4,70,71,73);(H,6,7)/t36-,37-,38-,39-,40-,41-,42-,43-,44-,45-,46-,48-,49-;/m0./s1
InChI Key
XQPDFHFOCHVEOB-HAYJCLMBSA-N

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