3X FLAG peptide TFA

3X FLAG peptide TFA is a synthetic peptide with a 3-time repeated DYKXXD motif.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.

CAT No: R1140

Synonyms/Alias:3X FLAG peptide TFA; 3X Flag Peptide Trifluoroacetate; 402750-12-3; MFCD32666184

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cGMP Peptide
  • Registration of APIs
  • CMC information required for an IND
  • IND and NDA support
  • Drug master files (DMF) filing
M.F/Formula
C₁₂₂H₁₇₀F₃N₃₁O₅₁S
M.W/Mr.
2975.84
Sequence
One Letter Code: MDYKDHDGDYKDHDIDYKDDDDK
three Letter Code: Met-Asp-Tyr-Lys-Asp-His-Asp-Gly-Asp-Tyr-Lys-Asp-His-Asp-Ile-Asp-Tyr-Lys-Asp-Asp-Asp-Asp-Lys

3X FLAG peptide TFA is a synthetic peptide widely utilized in molecular biology and protein research due to its unique sequence and high affinity for anti-FLAG antibodies. Composed of three tandem FLAG epitope repeats, this peptide offers enhanced detection sensitivity and binding strength compared to single FLAG tags. Its trifluoroacetic acid (TFA) salt form ensures solubility and stability, making it suitable for a range of laboratory applications. The 3X FLAG sequence is recognized for its minimal interference with protein structure and function, providing a reliable tool for protein tagging, purification, and detection in various experimental systems.

Epitope Tagging: The 3X FLAG peptide is extensively used as an epitope tag in recombinant protein expression systems. By fusing the 3X FLAG sequence to target proteins, researchers can facilitate the identification and localization of expressed proteins within cells or tissues. The increased epitope density provided by the triple repeat enhances antibody binding, leading to improved sensitivity in immunodetection assays such as Western blotting, immunocytochemistry, and immunofluorescence. This application is particularly valuable when studying low-abundance proteins or when high signal-to-noise ratios are required.

Affinity Purification: In protein purification workflows, the 3X FLAG tag enables efficient and selective isolation of recombinant proteins using anti-FLAG affinity resins or magnetic beads. The strong and specific interaction between the tag and its corresponding antibody allows for gentle elution conditions, preserving protein integrity and activity. Researchers benefit from this approach in downstream applications that require highly purified and functionally active proteins, such as enzymatic assays, protein-protein interaction studies, and structural biology investigations.

Competitive Elution: The synthetic peptide itself can be employed for competitive elution of FLAG-tagged proteins from affinity matrices. By introducing the 3X FLAG peptide into the purification system, it competes with the tagged protein for antibody binding sites, thereby facilitating the release of the bound target under mild, non-denaturing conditions. This strategy minimizes the risk of protein denaturation or aggregation, supporting applications where native protein conformation is essential for functional or biophysical analyses.

Antibody Validation: Researchers often utilize the 3X FLAG peptide as a positive control to validate the specificity and performance of anti-FLAG antibodies in various immunoassays. By including the peptide in assay development or optimization protocols, it is possible to confirm antibody reactivity, assess background binding, and standardize detection conditions. This practice is essential for ensuring reproducibility and reliability in experimental workflows that rely on FLAG-based detection systems.

Assay Development: The 3X FLAG peptide serves as a valuable reagent in the development and calibration of quantitative assays, such as enzyme-linked immunosorbent assays (ELISAs) or surface plasmon resonance (SPR) studies. Its well-defined sequence and predictable binding properties enable the generation of standard curves, facilitate assay optimization, and support the quantification of FLAG-tagged analytes. This application is particularly pertinent in high-throughput screening, biomarker discovery, and the validation of protein interaction networks where robust and reproducible assay performance is critical.

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