Compstatin control peptide

Control peptide for compstatin, and a complement inhibitor.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.
Compstatin control peptide(CAS 301544-78-5)

CAT No: R0856

CAS No:301544-78-5

Synonyms/Alias:Compstatin control peptide;301544-78-5;IAVVQDWGHHRAT;AKOS024457805;AKOS040764225;DA-52037;PD079615;S-301544-78-5;

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M.F/Formula
C66H101N23O17
M.W/Mr.
1488.7
Sequence
One Letter Code:IAVVQDWGHHRAT
Three Letter Code:H-Ile-Ala-Val-Val-Gln-Asp-Trp-Gly-His-His-Arg-Ala-Thr-NH2
Appearance
White lyophilised solid
Purity
>98 %

Compstatin control peptide is a synthetic peptide derivative commonly utilized in complement system research as a negative control for functional studies involving compstatin analogs. As a structurally related but biologically inactive sequence, it serves as a critical reference tool for distinguishing specific inhibitory effects of compstatin on complement activation from nonspecific peptide-related phenomena. The control peptide is specifically designed to lack the complement inhibitory activity exhibited by active compstatin variants, making it an essential reagent for validating assay specificity and experimental outcomes in immunological and inflammatory research contexts.

Assay validation: In complement inhibition assays, the use of a compstatin control peptide is fundamental for establishing the specificity of observed biological effects. By including the inactive control alongside active compstatin analogs, researchers can confirm that reductions in complement activity are due to targeted blockade of the C3 protein rather than nonspecific peptide interactions, aggregation, or other confounding variables. This approach enhances the reliability of data interpretation in both in vitro and ex vivo experimental models.

Mechanistic studies: The control peptide is widely employed in mechanistic investigations to parse out the molecular basis of complement modulation. By comparing cellular or biochemical responses elicited by the active inhibitor and its inactive counterpart, scientists can delineate the precise contributions of complement C3 inhibition versus unrelated peptide-mediated effects. This distinction is especially crucial in studies dissecting downstream signaling pathways, immune cell activation, or inflammatory mediator release triggered by complement activity.

Peptide structure-function analysis: Researchers utilize the compstatin control peptide to explore structure-activity relationships within the compstatin family. By contrasting the biological inactivity of the control with the potent inhibitory properties of active compstatin sequences, it becomes possible to map critical amino acid residues and conformational features responsible for complement binding and inhibition. Such comparative analyses support the rational design and optimization of next-generation complement inhibitors with improved selectivity and potency.

Background control in immunoassays: In immunoassays and bioanalytical platforms measuring complement activation, the inclusion of an inactive peptide control is essential for accurate baseline determination. The compstatin control peptide helps define background signal levels, ensuring that any assay readouts attributed to complement inhibition are genuinely due to the functional activity of compstatin analogs rather than artifacts arising from peptide addition. This practice is vital for robust quantification and interpretation of complement-targeted experimental results.

Peptide formulation and delivery research: The control peptide also finds application in studies focused on peptide formulation, stability, and delivery systems. By serving as a nonfunctional analog, it allows investigators to evaluate the effects of formulation strategies, carrier systems, or storage conditions on peptide integrity and bioavailability without confounding functional activity. Such studies contribute to the development of more effective peptide-based reagents and delivery platforms for complement research and related biochemical applications.

Solubility
-20 °C
InChI
InChI=1S/C66H101N23O17/c1-10-32(6)50(68)63(104)80-34(8)55(96)87-52(31(4)5)65(106)88-51(30(2)3)64(105)83-42(17-18-47(67)91)59(100)86-46(23-49(93)94)62(103)84-43(20-36-24-75-40-15-12-11-14-39(36)40)57(98)76-27-48(92)81-44(21-37-25-72-28-77-37)60(101)85-45(22-38-26-73-29-78-38)61(102)82-41(16-13-19-74-66(70)71)58(99)79-33(7)56(97)89-53(35(9)90)54(69)95/h11-12,14-15,24-26,28-35,41-46,50-53,75,90H,10,13,16-23,27,68H2,1-9H3,(H2,67,91)(H2,69,95)(H,72,77)(H,73,78)(H,76,98)(H,79,99)(H,80,104)(H,81,92)(H,82,102)(H,83,105)(H,84,103)(H,85,101)(H,86,100)(H,87,96)(H,88,106)(H,89,97)(H,93,94)(H4,70,71,74)/t32-,33-,34-,35+,41-,42-,43-,44-,45-,46-,50-,51-,52-,53-/m0/s1
InChI Key
SAJZITDYWAOPDD-LSPMIEDISA-N
Isomeric SMILES
CC[C@H](C)[C@@H](C(=O)N[C@@H](C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CC1=CNC2=CC=CC=C21)C(=O)NCC(=O)N[C@@H](CC3=CN=CN3)C(=O)N[C@@H](CC4=CN=CN4)C(=O)N[C@@H](CCCN=C(N)N)C(=O)N[C@@H](C)C(=O)N[C@@H]([C@@H](C)O)C(=O)N)N

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