Boc-Arg(Boc)2-OH

Boc-Arg(Boc)2-OH is a protected arginine derivative in which the α-amino group is masked as a Boc (tert-butoxycarbonyl) carbamate and the guanidinium side chain is further protected by two Boc groups, yielding a doubly Boc-protected guanidine motif. The molecule contains a free carboxylic acid functional group (-CO2H) while the basic side-chain nitrogens are carbamated, which suppresses undesired side reactions and modulates hydrogen-bonding and basicity during synthetic handling. In peptide synthesis workflows, this protected amino acid functions as a stepwise building block that supports controlled coupling of the arginine residue while maintaining chemoselectivity of the reactive α-carboxyl and α-amino equivalents under protection-group-compatible conditions.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.

CAT No: CP27618

CAS No:97745-69-2

Synonyms/Alias:97745-69-2;BOC-ARG(BOC)2-OH;(S,E)-5-(2,3-Bis(tert-butoxycarbonyl)guanidino)-2-((tert-butoxycarbonyl)amino)pentanoicacid;Nalpha,Nomega,Nomega'-Tris-Boc-L-arginine;11-Oxa-2,4,9-triazatridecanoicacid,8-carboxy-4-[(1,1-dimethylethoxy)carbonyl]-3-imino-12,12-dimethyl-10-oxo-,1-(1,1-dimethylethyl)ester,(8S)-;SCHEMBL3439703;CTK8B3887;BGOFOVHACSQSIE-ZDUSSCGKSA-N;MolPort-020-004-542;C21H38N4O8;ANW-43384;ANW-73951;KM3452;ZINC15721594;AKOS016008640;AKOS025118619;AJ-67823;AJ-67824;BP-10772;KB-212051;TC-162696;Z6014;(S)-5-(N',N''-di-tert-butoxycarbonylguanidino)-2-tert-butoxycarbonylaminopentanoicacid

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M.F/Formula
C21H38N4O8
M.W/Mr.
474.56

Boc-Arg(Boc)2-OH is a protected arginine building block featuring a Boc-protected alpha-amino group and a Boc-protected guanidinium side chain, supplied as a protected amino acid derivative for peptide assembly. The presence of the strongly basic guanidinium functionality, masked as a Boc-protected group, supports controlled incorporation of arginine residues into protected peptide segments while minimizing undesired side reactions during chain elongation. This reagent is commonly used in peptide synthesis workflows where orthogonal protection and reliable deprotection strategies are required to generate arginine-containing peptides and related pharmaceutical intermediates.

1. Fmoc-Compatible Peptide Segments

Boc-Arg(Boc)2-OH is used by custom peptide synthesis groups and medicinal chemistry laboratories to incorporate arginine residues into protected peptide segments when Boc-based protection schemes are employed. The Boc-protected guanidinium side chain helps maintain the strongly basic character of arginine in a masked form during coupling and intermediate handling, which is particularly valuable for building longer sequences containing multiple basic residues. Downstream, controlled deprotection allows access to the native guanidinium functionality in the assembled peptide, supporting the preparation of arginine-rich peptides used in structure-activity relationship studies and peptide lead optimization.

2. Boc/Boc Peptide Library Synthesis

Boc-Arg(Boc)2-OH supports peptide library construction where consistent protection of both the alpha-amino group and the arginine side chain is required to streamline parallel synthesis and purification. Research teams developing combinatorial peptide sets often rely on Boc-protected arginine derivatives to reduce variability associated with side-chain reactivity and to standardize handling across different analogs. This makes the reagent a practical choice for generating peptide intermediates that preserve the arginine side chain as a protected group until the final deprotection step, enabling efficient downstream screening workflows in chemical biology and medicinal chemistry programs.

3. Pharmaceutical Intermediate Assembly

Boc-Arg(Boc)2-OH is widely used in pharmaceutical intermediate development for preparing arginine-containing protected fragments that serve as building blocks toward larger drug-like molecules, peptidomimetics, and peptide-based candidates. The masked guanidinium group is advantageous during multi-step synthesis because it reduces the likelihood of salt formation and side reactions that can complicate purification and coupling in intermediate stages. Synthetic teams value this protected arginine derivative for producing well-defined intermediates that can be carried forward into final assembly steps where deprotection and conversion to the active structural motif are performed under controlled conditions.

4. Arginine-Rich Peptide Standards

Boc-Arg(Boc)2-OH is used to generate protected or partially deprotected arginine-containing peptide standards for analytical method development and characterization workflows. Analytical laboratories preparing reference materials for LC-MS, HPLC, and peptide mapping commonly require reproducible arginine-containing sequences and fragments, especially when basic residues influence retention behavior and ionization. By using a Boc-protected arginine building block, researchers can build defined peptide fragments with the arginine side chain protected during synthesis and handling, improving consistency from batch to batch and supporting reliable characterization of peptide products and intermediates.

Size
1 g;5 g;25 g;
InChI
1S/C21H38N4O8/c1-19(2,3)31-16(28)23-13(14(26)27)11-10-12-22-15(24-17(29)32-20(4,5)6)25-18(30)33-21(7,8)9/h13H,10-12H2,1-9H3,(H,23,28)(H,26,27)(H2,22,24,25,29,30)/t13-/m0/s1
InChI Key
BGOFOVHACSQSIE-ZDUSSCGKSA-N
Canonical SMILES
CC(C)(C)OC(=O)NC(CCCN=C(NC(=O)OC(C)(C)C)NC(=O)OC(C)(C)C)C(=O)O

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