Boc-D-Pen(Acm)-OH

Boc-D-Pen(Acm)-OH is a protected, non-natural amino acid derivative featuring a D-configured penicillamine core bearing an Acm (acetamidomethyl) thioether-protected side chain and a Boc-protected amino terminus. The molecule contains a Boc carbamate at the alpha-amino group, a free carboxylic acid functionality, and an Acm-protected sulfur substituent that masks thiol reactivity while maintaining the characteristic side-chain geometry of penicillamine. In peptide chemistry and chemical biology, this compound is used as a protected building block for stepwise assembly of peptides or peptide-like structures, where the orthogonal protection pattern supports controlled side-chain deprotection and subsequent functionalization of the penicillamine sulfur.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.

CAT No: CP26713

CAS No:201421-14-9

Synonyms/Alias:201421-14-9;Boc-S-acetamidomethyl-D-penicillamine;C13H24N2O5S;BOC-D-PEN(ACM)-OH;CTK4E3389;ZINC2517121;6795AD;AKOS015836506;Boc-beta,beta-dimethyl-D-Cys(Acm)-OH;RTR-009378;TR-009378;K-5897;I05-1014;D-Valine,3-[[(acetylamino)methyl]thio]-N-[(1,1-dimethylethoxy)carbonyl]-;(2S)-2-[(tert-butoxycarbonyl)amino]-3-[(acetamidomethyl)sulfanyl]-3-methylbutanoicacid

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cGMP Peptide
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  • Drug master files (DMF) filing
M.F/Formula
C13H24N2O5S
M.W/Mr.
320.41

Boc-D-Pen(Acm)-OH is a protected D-penicillamine building block bearing a Boc-protected amino group and an Acm (acetamidomethyl) protected thiol on the side chain. This thiol-protection pattern is widely used in peptide and thioether-forming synthesis workflows where selective deprotection and controlled sulfur chemistry are required. The D-configuration makes it particularly valuable for stereochemically defined peptide segments and for preparing cysteine-analog motifs in medicinal chemistry and chemical biology studies.

1. Stereodefined Peptide Segments

Boc-D-Pen(Acm)-OH is used by peptide synthesis groups to introduce a D-penicillamine residue into peptide sequences with defined stereochemistry at the alpha-carbon. Its Boc protection supports standard protected-amino-acid coupling workflows, while the Acm-protected side-chain sulfur enables downstream sulfur chemistry without premature thiol reactivity during assembly. This makes the reagent especially relevant for custom peptide synthesis and for preparing peptide analogs used in structure-activity relationship studies, where maintaining a specific stereochemical configuration and a controlled sulfur handle is important.

2. Selective Sulfur Chemistry

Boc-D-Pen(Acm)-OH is commonly selected when a protected sulfur functionality must be carried through multi-step synthesis and then revealed or transformed under conditions compatible with other protecting groups. The Acm-thiol protection provides a practical strategy for managing chemoselectivity, allowing researchers to postpone thiol-related transformations until late-stage steps in peptide or small-molecule intermediate preparation. As a result, it is frequently employed in medicinal chemistry and peptide chemistry programs that require controlled access to sulfur for thioether formation, disulfide-related strategies, or other sulfur-based derivatization routes.

3. Pharmaceutical Intermediate Development

Boc-D-Pen(Acm)-OH is used in the development of sulfur-containing pharmaceutical intermediates and advanced building blocks where stereochemical control and functional-group orthogonality are required. The combination of Boc and Acm protection supports robust handling during iterative synthetic steps, while the protected thiol provides a latent functionality that can be converted at a chosen stage to access penicillamine-derived motifs. Teams in process chemistry and specialty intermediate manufacturing use this reagent to prepare defined thio-functional intermediates for subsequent coupling, scaffold elaboration, or route optimization in small-molecule and peptidomimetic synthesis programs.

Size
1 g;5 g;
InChI
1S/C13H24N2O5S/c1-8(16)14-7-21-13(5,6)9(10(17)18)15-11(19)20-12(2,3)4/h9H,7H2,1-6H3,(H,14,16)(H,15,19)(H,17,18)/t9-/m0/s1
InChI Key
SUSPMXBDNAADFK-VIFPVBQESA-N
Canonical SMILES
CC(=O)NCSC(C)(C)C(C(=O)O)NC(=O)OC(C)(C)C

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