Scrambled 10Panx

Scrambled 10Panx, scrambled version of 10panx, is a Panx-1 mimetic inhibitory peptide that blocks pannexin-1 gap junctions.

Designed for biological research and industrial applications, not intended for individual clinical or medical purposes.

CAT No: R0939

CAS No:1315378-72-3

Synonyms/Alias:Scrambled 10Panx;1315378-72-3;DTXSID00856125;PD118838;Phenylalanylserylvalyltyrosyltryptophylalanylglutaminylalanyl-alpha-aspartyl-N~5~-(diaminomethylidene)ornithine;

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cGMP Peptide
  • Registration of APIs
  • CMC information required for an IND
  • IND and NDA support
  • Drug master files (DMF) filing
M.F/Formula
C58H79N15O16
M.W/Mr.
1242.3
Sequence
One Letter Code:FSVYWAQADR
Three Letter Code:H-DL-Phe-DL-Ser-DL-Val-DL-Tyr-DL-Trp-DL-Ala-DL-Gln-DL-Ala-DL-Asp-DL-Arg-OH
Labeling Target
Gap Channels
Purity
>98%
Activity
Inhibitor

Scrambled 10Panx is a synthetic peptide designed as a negative control for studies involving pannexin-1 channel function and peptide-mediated modulation of cellular signaling. Structurally, it consists of the same amino acid composition as the functional 10Panx peptide but with a randomized sequence, rendering it biologically inert with respect to pannexin-1 binding or inhibition. Its key utility lies in distinguishing specific biological effects of the active peptide from nonspecific or off-target responses in experimental systems. Widely recognized in peptide research, Scrambled 10Panx is an essential tool for validating the selectivity and mechanistic specificity of pannexin-targeted studies.

Negative control experiments: In peptide-based research, Scrambled 10Panx serves as a critical negative control to confirm the specificity of observed cellular or molecular effects attributed to the active 10Panx peptide. By employing this scrambled sequence in parallel experimental setups, researchers can differentiate between true pannexin-1 channel modulation and nonspecific peptide interactions. This approach strengthens the validity of mechanistic conclusions, ensuring that experimental outcomes are not confounded by sequence-independent effects.

Signal transduction studies: The use of Scrambled 10Panx is integral in dissecting the role of pannexin-1 channels in intracellular signaling pathways. When applied alongside the functional peptide, the scrambled control allows investigators to attribute changes in ATP release, calcium flux, or downstream signaling events specifically to targeted channel modulation. Such rigor is essential for unraveling the molecular underpinnings of pannexin-mediated communication in both physiological and pathophysiological contexts.

Assay validation: Scrambled 10Panx is routinely incorporated into biochemical and cell-based assays to validate assay specificity and reliability. Its inclusion helps identify and eliminate false-positive results that may arise from generic peptide properties, such as charge, hydrophobicity, or peptide uptake. By ensuring that assay readouts are attributable solely to sequence-dependent interactions, the scrambled control enhances the interpretive power of experimental data.

Peptide uptake and stability assessment: Researchers utilize Scrambled 10Panx to evaluate peptide uptake, distribution, and metabolic stability within cellular environments. Because it shares physicochemical properties with the active peptide but lacks biological activity, it enables direct assessment of peptide handling by cells without confounding functional effects. This application is particularly valuable for optimizing peptide delivery protocols and for distinguishing between functional and non-functional peptide internalization.

Methodological development: The scrambled control peptide is also instrumental in the development and optimization of novel experimental protocols involving peptide modulators. Its use facilitates the identification of background signals, peptide-induced artifacts, or non-specific cellular responses, thereby supporting the refinement of experimental conditions. As a result, methodological advances in pannexin-1 research and peptide-based assay design are underpinned by the rigorous application of scrambled peptide controls such as Scrambled 10Panx.

Long-term Storage Conditions
Soluble in DMSO
InChI
InChI=1S/C58H79N15O16/c1-29(2)47(73-55(86)44(28-74)72-50(81)37(59)23-32-11-6-5-7-12-32)56(87)71-41(24-33-16-18-35(75)19-17-33)53(84)70-42(25-34-27-64-38-14-9-8-13-36(34)38)52(83)66-30(3)48(79)67-39(20-21-45(60)76)51(82)65-31(4)49(80)69-43(26-46(77)78)54(85)68-40(57(88)89)15-10-22-63-58(61)62/h5-9,11-14,16-19,27,29-31,37,39-44,47,64,74-75H,10,15,20-26,28,59H2,1-4H3,(H2,60,76)(H,65,82)(H,66,83)(H,67,79)(H,68,85)(H,69,80)(H,70,84)(H,71,87)(H,72,81)(H,73,86)(H,77,78)(H,88,89)(H4,61,62,63)
InChI Key
VNQGVHMGXBRHRA-UHFFFAOYSA-N
Isomeric SMILES
C[C@@H](C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CCCN=C(N)N)C(=O)O)NC(=O)[C@H](CCC(=O)N)NC(=O)[C@H](C)NC(=O)[C@H](CC1=CNC2=CC=CC=C21)NC(=O)[C@H](CC3=CC=C(C=C3)O)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CO)NC(=O)[C@H](CC4=CC=CC=C4)N

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