EDDNp is a non-proteinogenic amino acid derivative that functions as an amino-acid-based coupling reagent precursor, bearing an amino functionality and a carboxylate-equivalent moiety configured for amide bond formation chemistry. The molecule contains an activated carboxyl component (EDDnp) alongside an amino group, and its structural features enable controlled reactivity toward nucleophiles during peptide-related coupling or derivatization workflows. In biochemical and synthetic research settings, EDDnp is employed to prepare amino acid and peptide derivatives or to introduce chemically defined handles for analytical method development, structure-activity studies, and chemical biology labeling strategies.
CAT No: CP26957
CAS No:28767-75-1
Synonyms/Alias:eddnp;28767-75-1;n1-(2,4-dinitrophenyl)ethane-1,2-diamine;n-(2,4-dinitrophenyl)ethane-1,2-diamine;n1-(2,4-dinitro-phenyl)-ethane-1,2-diamine;ST006404;N'-(2,4-dinitrophenyl)ethane-1,2-diamine;N*1*-(2,4-Dinitro-phenyl)-ethane-1,2-diamine;DNPED;AC1Q1ZKA;SCHEMBL502704;AC1L52N7;CTK7E8952;AIUKPEQJKQUQKZ-UHFFFAOYSA-N;MolPort-000-157-673;ZINC4180621;N1--ETHANE-1,2-DIAMINE;AR-1J7411;STK059455;N-(2,4-Dinitrophenyl)ethylenediamine;AKOS000286119;N-(2-aminoethyl)-2,4-dinitroaniline;MCULE-6894774158;(2-aminoethyl)(2,4-dinitrophenyl)amine;OR005496
EDDNp is an amino acid derivative bearing a chiral, carboxyl-activated motif suitable for peptide coupling chemistry, with a defined N-functional group that modulates reactivity toward nucleophiles. The molecule incorporates a carboxyl functionality that can participate in amide bond formation after activation or conversion to a coupling-ready intermediate, while its stereochemical configuration is retained to support stereocontrolled incorporation into peptide sequences. EDDnp's electrophilic/activated character and the presence of a nitrogen-containing leaving group framework enable controlled transformation under peptide-synthesis conditions, including compatibility with standard coupling and protection/deprotection workflows. The resulting functional group profile makes EDDnp relevant as a research-grade intermediate for amino acid derivatization and downstream construction of peptide-like scaffolds.
1. Peptide Coupling Chemistry
EDDNp is utilized in peptide synthesis workflows where amino acid activation and amide bond formation are required under controlled conditions. The activated carboxyl-derived functionality and associated nitrogen-containing leaving group character facilitate conversion into a coupling-ready species that can react with amines to build peptide bonds. The stereogenic center inherent to the amino acid framework supports stereoretentive incorporation into growing peptide chains, which is important for generating defined stereochemical sequences for biochemical research. Downstream, EDDnp-derived intermediates can be applied to prepare protected amino acid derivatives and peptide building blocks used in iterative solid-phase or solution-phase assembly strategies.
2. Protected Amino Acid Intermediates
EDDNp is applied as a chiral amino acid intermediate for protected amino acid synthesis and controlled functional group staging. The compound's N- and carboxyl-related functionalities can be leveraged to manage reactivity during multi-step sequences, where selective protection, activation, and later deprotection are needed to prevent side reactions. The stereochemical integrity of the amino acid backbone helps maintain the configuration of the incorporated residue when converting EDDnp into other protected forms such as coupling-compatible derivatives. The resulting intermediates support downstream synthesis of peptide fragments, peptidomimetics, and structure-defined amino acid analogs used in synthetic organic chemistry.
3. Chemical Biology Labeling
EDDNp is suitable for chemical biology applications that require incorporation of amino acid-derived fragments into labeled biomolecule constructs. The functional group pattern that enables amide coupling can be used to connect amino acid units to targeting ligands, linkers, or reporter-bearing moieties, supporting the generation of peptide conjugates for binding and interaction studies. The defined stereochemistry of the amino acid component helps preserve recognition elements in peptide-like structures that participate in molecular recognition events. EDDnp-based coupling strategies can therefore feed into downstream synthesis of conjugation-ready intermediates for biomolecule modification and analytical probe development.
4. Peptidomimetic Scaffold Construction
EDDNp is employed in peptidomimetic construction where amino acid-derived building blocks are transformed into peptide-like scaffolds with controlled functional group placement. The activated carboxyl chemistry and nitrogen functionality enable formation of amide linkages that mimic peptide bonds while allowing subsequent derivatization of side-chain or terminal positions through standard protection-group logic. Stereochemical control at the chiral center can be carried through to generate diastereomerically defined analogs for molecular design and SAR-oriented synthesis. Downstream utility includes preparation of constrained or functionalized peptidomimetics that serve as intermediates for fragment-based studies and scaffold optimization in medicinal chemistry research.
5. Process Chemistry Intermediate Preparation
EDDNp is relevant to process chemistry intermediate preparation for manufacturing routes that require reproducible amino acid activation steps and predictable reactivity profiles. The compound's activated carboxyl-derived functionality and defined N-functional framework support conversion into coupling-ready materials that can be handled as discrete intermediates during batch synthesis. The stereochemical integrity of the amino acid component helps reduce the need for extensive stereochemical correction in downstream peptide fragment assembly. EDDnp-derived intermediates can be incorporated into fine chemical synthesis planning for peptide-manufacturing supply chains where consistent impurity management and controlled functional group transformations are required.
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