L-Allylglycine is an L-configured, non-proteinogenic amino acid featuring a glycine backbone bearing an allyl side chain (CH2-CH=CH2) instead of a conventional amino acid side group. The molecule contains a free amino group and a free carboxyl group, with the allyl functionality providing an alkene handle that can participate in chemoselective derivatization reactions while the amino and carboxyl groups support standard amino acid coupling chemistries. L-Allylglycine is used in peptide and amino acid derivative synthesis to introduce an allyl-bearing residue for structure-activity studies, chemical biology labeling strategies, and the preparation of more complex conjugates via post-coupling functionalization.
CAT No: CP02602
CAS No:195316-72-4
Synonyms/Alias:195316-72-4;(S)-2-Aminopent-4-enoicacidhydrochloride;(S)-(-)-2-Amino-4-pentenoicacidhydrochloride;L-2-AllylglycineHydrochloride;SCHEMBL3388378;CTK3I9789;L-alpha-Allylglycinehydrochloride;MolPort-008-155-465;MAY00253;ANW-42978;CA-506;SBB086801;AKOS005259637;RP01718;RTR-036048;AK-33932;AB0048071;(S)-2-Amino-4-pentenoicAcidHydrochloride;(2S)-2-aminopent-4-enoicacidhydrochloride;X-4237
L-Allylglycine is an L-configured amino acid analog featuring a glycine backbone bearing an allyl side chain, providing a chiral amino acid framework with an additional terminal alkene for downstream functionalization. The molecule contains a primary amino group and a carboxylic acid (or, depending on the supplied form, corresponding protected/activated equivalents), enabling standard amino acid coupling chemistry while preserving the stereochemical relationship at the alpha carbon. The allyl substituent can participate in selective transformations such as radical additions, metathesis, or cycloaddition chemistry, allowing conversion into allyl-derived heterocycles, constrained scaffolds, or side-chain modified peptidomimetics. As a chiral amino acid intermediate, L-allylglycine can be incorporated into peptide-like structures or used to build noncanonical residues for chemical biology and process-oriented fine chemical synthesis.
1. Peptide Synthesis
L-Allylglycine supports peptide building block workflows by combining an L-amino acid stereocenter with a glycine-like backbone that can be activated for amide bond formation using standard coupling strategies. The side-chain allyl group remains available for post-coupling derivatization, enabling sequential design where peptide assembly precedes alkene-functional transformations. N- and C-terminal protection strategies can be applied to control chemoselectivity during coupling and to prevent allyl-side reactions under peptide synthesis conditions. Downstream, L-allylglycine-containing peptides and peptide analogs can be used as substrate-like scaffolds for studying sequence-dependent reactivity and for generating functionalized conjugates after side-chain conversion.
2. Side-Chain Functionalization
L-Allylglycine is suitable for synthetic organic chemistry routes that exploit the terminal alkene for selective late-stage modification of amino acid derivatives. The allyl substituent can undergo transformations that introduce new functional handles, such as cyclized motifs or additional substituents, while the alpha-amino and carboxyl functionalities can be protected or activated to direct chemoselective steps. Protecting-group strategies for the amino and carboxyl groups allow the allyl group to be preserved during intermediate preparation and then converted under conditions compatible with peptide-like functionality. Resulting allyl-derived amino acid derivatives can serve as intermediates for peptidomimetics, constrained building blocks, and structure-modified analogs in medicinal chemistry and chemical biology research.
3. Chemical Biology Probes
L-Allylglycine can be employed in chemical biology research as a noncanonical amino acid handle for constructing labeled or reactive biomolecule analogs. The L-configuration and amino acid functional groups enable incorporation into peptide fragments or protein-mimetic constructs, while the allyl side chain provides a chemically addressable moiety for subsequent coupling or scaffold generation. Protection and deprotection control can be used to manage reactivity of the amino acid during synthesis of probe precursors and to maintain compatibility with downstream conjugation steps. Generated L-allylglycine-containing probes may be applied to investigate biomolecular recognition, enzyme tolerance toward noncanonical residues, or the behavior of side-chain-modified peptide motifs in assay formats.
4. Peptidomimetics And SAR
L-Allylglycine serves as a chiral residue for peptidomimetic construction where side-chain unsaturation enables systematic exploration of structure-activity relationship drivers. The allyl group can be converted into constrained or substituted motifs that modulate sterics and local electronics relative to the parent glycine-like side chain, while the alpha-amino acid stereochemistry maintains defined 3D geometry. Protection-group selection for the amino and carboxyl functionalities supports stepwise synthesis of analog series and supports incorporation into longer peptide-like scaffolds. Downstream, L-allylglycine-derived analogs can be used to generate libraries of noncanonical residues for SAR studies, fragment-based optimization, and scaffold diversification in applied discovery chemistry.
5. Process Chemistry Intermediate
L-Allylglycine is applicable as a chiral amino acid intermediate in process chemistry and specialty chemical production where an L-amino acid framework with an alkene handle is required for controlled downstream transformations. The presence of both amino and carboxyl functionalities supports conversion into activated derivatives for coupling chemistry, while the allyl group can be carried through multi-step sequences as a masked or reactive functionality depending on protection strategy. Industrially relevant manufacturing routes can leverage chemoselective protection of the amine and activation of the acid to manage impurity formation and to enable consistent feedstock behavior in fine chemical synthesis. Resulting derivatives from L-allylglycine can feed into manufacturing of functionalized amino acid building blocks, peptide-like intermediates, and alkene-derived heterocycle or conjugate precursors used across chemical manufacturing workflows.
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